BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016B06SP1|AL426959
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1672 1892 0.0
>3x_Contig1672
Length = 13609
Score = 1892 bits (948), Expect = 0.0
Identities = 963/974 (98%)
Strand = Plus / Minus
Query: 1 gatcattatatcagacaaggttcatgawatatctgggattcacggagtaagattcagaaa 60
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6384 gatcatgatatcagacaaggttcatgaaatatctgggattcacggagtaagattcagaaa 6325
Query: 61 cttttcgttgcctgaatcaaaaaccactacgcattgcttctcactaagtgagaagaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6324 cttttcgttgcctgaatcaaaaaccactacgcattgcttctcactaagtgagaagaagtt 6265
Query: 121 tatcaatcttgacaaagatgaaactcaaaaactcgctatcaacaagcataaccgcagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6264 tatcaatcttgacaaagatgaaactcaaaaactcgctatcaacaagcataaccgcagaca 6205
Query: 181 tttaatgagaatctatccgcacatgttgcggtacaaatcctccaatttcaacccaatacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6204 tttaatgagaatctatccgcacatgttgcggtacaaatcctccaatttcaacccaatacg 6145
Query: 241 attttggaaagaaggagtacaaatggtcgcaacaaactggcagacgtatgacctgggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6144 attttggaaagaaggagtacaaatggtcgcaacaaactggcagacgtatgacctgggaca 6085
Query: 301 acaattgawccatgcaatgttccaagtttcactagatagawattccatctggcattctgg 360
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6084 acaattgaaccatgcaatgttccaagtttcactagatagaaattccatctggcattctgg 6025
Query: 361 gtatgttttgawgcccgctcacttgcgaaaagagatacataawatgawggacattccagt 420
||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 6024 gtatgttttgaagcccgctcacttgcgaaaagagatacataaaatgaaggacattccagt 5965
Query: 421 aattatggaaaggctcaaacgggagaagattcatatccatttggacgtaatttctggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5964 aattatggaaaggctcaaacgggagaagattcatatccatttggacgtaatttctggcca 5905
Query: 481 gatgttatccttacaaaactgcaagatactagcaccattcgtagaaatcgaactcattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5904 gatgttatccttacaaaactgcaagatactagcaccattcgtagaaatcgaactcattac 5845
Query: 541 tgacaataccatggwatcacttcaccttaccaactgcttgcwgccaatggggtatacttc 600
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5844 tgacaataccatggaatcacttcaccttaccaactgcttgcagccaatggggtatacttc 5785
Query: 601 caataactctacccatgctaccggaattactagcatgagtaatgcttcatatggtacttt 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5784 caataactctacccatgctaccggaattactagcatgagtaatgcttcaaatggtacttt 5725
Query: 661 tgctaacattactagtacctcaaccaagcgcgttgatagcaacggcagcagcggtaagac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5724 tgctaacattactagtacctcaaccaagcgcgttgatagcaacggcagcagcggtaagac 5665
Query: 721 tgaaccactttgtgaaagtwatggaaccactgttatttcaggtttgtccgcggaagacgg 780
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5664 tgaaccactttgtgaaagtaatggaaccactgttatttcaggtttgtccgcggaagacgg 5605
Query: 781 aatactcagtactccatctgctcctccagcagtatctgtacctgtccttagttcaccgca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5604 aatactcagtactccatctgctcctccagcagtatctgtacctgtccttagttcaccgca 5545
Query: 841 actattttcgacaaaatgcttccgtgataacggcttcagtcccgtgtggaatgcgtcgtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5544 actattttcgacaaaatgcttccgtgataacggcttcagtcccgtgtggaatgcgtcgtt 5485
Query: 901 cgagtgtacacttacaaacactacgttcaacttcgtgcggtttacagtcaagaactccac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5484 cgagtgtacacttacaaacactacgttcaacttcgtgcggtttacagtcaagaactccac 5425
Query: 961 gcaaactatcgcaa 974
||||||||||||||
Sbjct: 5424 gcaaactatcgcaa 5411
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5276
Number of Sequences: 1807
Number of extensions: 5276
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)